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Using a combination of in vitro and in silico approaches to explore the biological potential of Arceuthobium oxycedri extracts: innovative insights from the lab to functional applications

Research output: Contribution to journalArticleResearchpeer review

Authors

  • Gokhan Zengin
  • Shakeel Ahmed
  • Mehmet Veyis Cetiz
  • Evren Yildiztugay
  • Tina Kostka
  • Tuba Esatbeyoglu

External Research Organisations

  • Selcuk University
  • Harran University
  • University of Nyíregyháza
  • University of Kaiserslautern-Landau (RPTU)

Details

Original languageEnglish
JournalEuropean Food Research and Technology
Publication statusAccepted/In press - 2025

Abstract

In the present study, the antioxidant capacity, enzyme inhibitory activities, and chemical composition of various extracts from Arceuthobium oxycedri were assessed by LC-MS/MS. Extracts were further evaluated for their cytotoxicity by the resazurin reduction assay and for their antioxidant activity by qRT-PCR in liver carcinoma HepG2 cells. The LC-MS/MS indicated that in both ethanolic and ethanol/water (70%) extracts, there were highly identified phenolic compounds, and they exhibited greater antioxidant effects. These extracts exhibited potential inhibitory activities against acetylcholinesterase and butyrylcholinesterase with the values of 4.72 and 4.41 mg GALAE/g, respectively. The ethanol extract showed the highest α-glucosidase inhibitory activity, 2.19 mmol ACAE/g, probably due to its high content of proanthocyanidins and hydroxycinnamic acids. Furthermore, results demonstrate that some of the extracts significantly reduce the expression of the antioxidant gene HO-1, while γ-GCS was slightly increased. To further investigate the molecular mechanisms, network pharmacology approach was used to identify potential targets related to HO-1 and NRF2.The analysis revealed key proteins associated with oxidative stress and metabolic pathways. Subsequently, molecular docking was performed on these identified targets, along with standard enzymes such as AChE, BChE, α-amylase, αglucosidase, and tyrosinase. The best-performing protein-ligand interactions were then selected for molecular dynamics simulations. These findings enable us to infer that ethanol and ethanol/water (70%) extracts represent the most promising candidates based on their chemical composition for their medicinal importance, represented by their rich contents of phenolic and flavonoid compounds.

Keywords

    A. oxycedri, Antioxidants, Chemical profiling, Enzyme inhibition, In silico, Network pharmacology, Oxidative stress

ASJC Scopus subject areas

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Using a combination of in vitro and in silico approaches to explore the biological potential of Arceuthobium oxycedri extracts: innovative insights from the lab to functional applications. / Zengin, Gokhan; Ahmed, Shakeel; Cetiz, Mehmet Veyis et al.
In: European Food Research and Technology, 2025.

Research output: Contribution to journalArticleResearchpeer review

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title = "Using a combination of in vitro and in silico approaches to explore the biological potential of Arceuthobium oxycedri extracts: innovative insights from the lab to functional applications",
abstract = "In the present study, the antioxidant capacity, enzyme inhibitory activities, and chemical composition of various extracts from Arceuthobium oxycedri were assessed by LC-MS/MS. Extracts were further evaluated for their cytotoxicity by the resazurin reduction assay and for their antioxidant activity by qRT-PCR in liver carcinoma HepG2 cells. The LC-MS/MS indicated that in both ethanolic and ethanol/water (70%) extracts, there were highly identified phenolic compounds, and they exhibited greater antioxidant effects. These extracts exhibited potential inhibitory activities against acetylcholinesterase and butyrylcholinesterase with the values of 4.72 and 4.41 mg GALAE/g, respectively. The ethanol extract showed the highest α-glucosidase inhibitory activity, 2.19 mmol ACAE/g, probably due to its high content of proanthocyanidins and hydroxycinnamic acids. Furthermore, results demonstrate that some of the extracts significantly reduce the expression of the antioxidant gene HO-1, while γ-GCS was slightly increased. To further investigate the molecular mechanisms, network pharmacology approach was used to identify potential targets related to HO-1 and NRF2.The analysis revealed key proteins associated with oxidative stress and metabolic pathways. Subsequently, molecular docking was performed on these identified targets, along with standard enzymes such as AChE, BChE, α-amylase, αglucosidase, and tyrosinase. The best-performing protein-ligand interactions were then selected for molecular dynamics simulations. These findings enable us to infer that ethanol and ethanol/water (70%) extracts represent the most promising candidates based on their chemical composition for their medicinal importance, represented by their rich contents of phenolic and flavonoid compounds.",
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TY - JOUR

T1 - Using a combination of in vitro and in silico approaches to explore the biological potential of Arceuthobium oxycedri extracts

T2 - innovative insights from the lab to functional applications

AU - Zengin, Gokhan

AU - Ahmed, Shakeel

AU - Cetiz, Mehmet Veyis

AU - Yildiztugay, Evren

AU - Cziáky, Zoltán

AU - Jeko, József

AU - Kostka, Tina

AU - Esatbeyoglu, Tuba

N1 - Publisher Copyright: © The Author(s) 2025.

PY - 2025

Y1 - 2025

N2 - In the present study, the antioxidant capacity, enzyme inhibitory activities, and chemical composition of various extracts from Arceuthobium oxycedri were assessed by LC-MS/MS. Extracts were further evaluated for their cytotoxicity by the resazurin reduction assay and for their antioxidant activity by qRT-PCR in liver carcinoma HepG2 cells. The LC-MS/MS indicated that in both ethanolic and ethanol/water (70%) extracts, there were highly identified phenolic compounds, and they exhibited greater antioxidant effects. These extracts exhibited potential inhibitory activities against acetylcholinesterase and butyrylcholinesterase with the values of 4.72 and 4.41 mg GALAE/g, respectively. The ethanol extract showed the highest α-glucosidase inhibitory activity, 2.19 mmol ACAE/g, probably due to its high content of proanthocyanidins and hydroxycinnamic acids. Furthermore, results demonstrate that some of the extracts significantly reduce the expression of the antioxidant gene HO-1, while γ-GCS was slightly increased. To further investigate the molecular mechanisms, network pharmacology approach was used to identify potential targets related to HO-1 and NRF2.The analysis revealed key proteins associated with oxidative stress and metabolic pathways. Subsequently, molecular docking was performed on these identified targets, along with standard enzymes such as AChE, BChE, α-amylase, αglucosidase, and tyrosinase. The best-performing protein-ligand interactions were then selected for molecular dynamics simulations. These findings enable us to infer that ethanol and ethanol/water (70%) extracts represent the most promising candidates based on their chemical composition for their medicinal importance, represented by their rich contents of phenolic and flavonoid compounds.

AB - In the present study, the antioxidant capacity, enzyme inhibitory activities, and chemical composition of various extracts from Arceuthobium oxycedri were assessed by LC-MS/MS. Extracts were further evaluated for their cytotoxicity by the resazurin reduction assay and for their antioxidant activity by qRT-PCR in liver carcinoma HepG2 cells. The LC-MS/MS indicated that in both ethanolic and ethanol/water (70%) extracts, there were highly identified phenolic compounds, and they exhibited greater antioxidant effects. These extracts exhibited potential inhibitory activities against acetylcholinesterase and butyrylcholinesterase with the values of 4.72 and 4.41 mg GALAE/g, respectively. The ethanol extract showed the highest α-glucosidase inhibitory activity, 2.19 mmol ACAE/g, probably due to its high content of proanthocyanidins and hydroxycinnamic acids. Furthermore, results demonstrate that some of the extracts significantly reduce the expression of the antioxidant gene HO-1, while γ-GCS was slightly increased. To further investigate the molecular mechanisms, network pharmacology approach was used to identify potential targets related to HO-1 and NRF2.The analysis revealed key proteins associated with oxidative stress and metabolic pathways. Subsequently, molecular docking was performed on these identified targets, along with standard enzymes such as AChE, BChE, α-amylase, αglucosidase, and tyrosinase. The best-performing protein-ligand interactions were then selected for molecular dynamics simulations. These findings enable us to infer that ethanol and ethanol/water (70%) extracts represent the most promising candidates based on their chemical composition for their medicinal importance, represented by their rich contents of phenolic and flavonoid compounds.

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KW - Antioxidants

KW - Chemical profiling

KW - Enzyme inhibition

KW - In silico

KW - Network pharmacology

KW - Oxidative stress

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U2 - 10.1007/s00217-025-04777-z

DO - 10.1007/s00217-025-04777-z

M3 - Article

AN - SCOPUS:105006926481

JO - European Food Research and Technology

JF - European Food Research and Technology

SN - 1438-2377

ER -

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