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Bubble Segmentation Based on Shape From Shading for In-Situ Microscopy

Publikation: Beitrag in Buch/Bericht/Sammelwerk/KonferenzbandAufsatz in KonferenzbandForschungPeer-Review

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OriginalspracheEnglisch
Titel des Sammelwerks21st International Conference on Electronics Communications and Computers
Seiten1-4
Seitenumfang4
PublikationsstatusVeröffentlicht - 11 Apr. 2011
Veranstaltung21st International Conference on Electronics Communications and Computers, CONIELECOMP 2011 - Cholula, Mexiko
Dauer: 28 Feb. 20112 März 2011

Abstract

This paper describes a new bubble segmentation algorithm based on shape from shading for in-situ microscopy. An in-situ microscope is an instrument to capture and analyze intensity images of cells inside of a bioreactor with minimal operator intervention and without the risk of culture contamination. For bubble segmentation, the closed bubble boundaries are first extracted by thresholding a depth map. The depth map is estimated by applying the Bichsel and Pentland's Shape From Shading algorithm. Then, each extracted closed bubble boundary is filled in to obtained the bubble regions. The experimental results revealed an average processing time of 2.68 seconds and very promising bubble segmentation results.

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Bubble Segmentation Based on Shape From Shading for In-Situ Microscopy. / Martinez, Geovanni; Frerichs, Jan Gerd; Scheper, Thomas.
21st International Conference on Electronics Communications and Computers. 2011. S. 1-4.

Publikation: Beitrag in Buch/Bericht/Sammelwerk/KonferenzbandAufsatz in KonferenzbandForschungPeer-Review

Martinez, G, Frerichs, JG & Scheper, T 2011, Bubble Segmentation Based on Shape From Shading for In-Situ Microscopy. in 21st International Conference on Electronics Communications and Computers. S. 1-4, 21st International Conference on Electronics Communications and Computers, CONIELECOMP 2011, Cholula, Mexiko, 28 Feb. 2011. https://doi.org/10.1109/CONIELECOMP.2011.5749321
Martinez, G., Frerichs, J. G., & Scheper, T. (2011). Bubble Segmentation Based on Shape From Shading for In-Situ Microscopy. In 21st International Conference on Electronics Communications and Computers (S. 1-4) https://doi.org/10.1109/CONIELECOMP.2011.5749321
Martinez G, Frerichs JG, Scheper T. Bubble Segmentation Based on Shape From Shading for In-Situ Microscopy. in 21st International Conference on Electronics Communications and Computers. 2011. S. 1-4 doi: 10.1109/CONIELECOMP.2011.5749321
Martinez, Geovanni ; Frerichs, Jan Gerd ; Scheper, Thomas. / Bubble Segmentation Based on Shape From Shading for In-Situ Microscopy. 21st International Conference on Electronics Communications and Computers. 2011. S. 1-4
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abstract = "This paper describes a new bubble segmentation algorithm based on shape from shading for in-situ microscopy. An in-situ microscope is an instrument to capture and analyze intensity images of cells inside of a bioreactor with minimal operator intervention and without the risk of culture contamination. For bubble segmentation, the closed bubble boundaries are first extracted by thresholding a depth map. The depth map is estimated by applying the Bichsel and Pentland's Shape From Shading algorithm. Then, each extracted closed bubble boundary is filled in to obtained the bubble regions. The experimental results revealed an average processing time of 2.68 seconds and very promising bubble segmentation results.",
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AU - Scheper, Thomas

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ER -

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