Loading [MathJax]/extensions/tex2jax.js

A simulation model for the whole life cycle of the slime mold Dictyostelium discoideum

Research output: Chapter in book/report/conference proceedingConference contributionResearchpeer review

Authors

  • Matthias Becker
Plum Print visual indicator of research metrics
  • Citations
    • Citation Indexes: 3
  • Captures
    • Readers: 6
see details

Details

Original languageEnglish
Title of host publicationProceedings
Subtitle of host publication24th European Conference on Modelling and Simulation, ECMS 2010
Pages247-252
Number of pages6
ISBN (electronic)978-0-9564944-1-2
Publication statusPublished - 2010
Event24th European Conference on Modelling and Simulation, ECMS 2010 - Kuala Lumpur, Malaysia
Duration: 1 Jun 20104 Jun 2010

Publication series

NameProceedings - 24th European Conference on Modelling and Simulation, ECMS 2010

Abstract

Slime molds are fascinating organisms, they can either live as an organism consisting out of a single cell or they can form a multi-cellular organism. Therefore from the biological point of view, the slime molds are studied in order to understand the evolutionary step from a single cell organism to a multi-cellular organism. Studies have shown that the behavior of cooperating single cell organisms exhibits synergistic emergent intelligence, for example finding shortest paths. Just recently, simulation and experiments with a real slime mold (Physarum polycephalum) have been used for traveling salesman like problems. In this work we present a simulation model for the slime mold Dictyostelium discoideum. Different to other studies, here the whole life-cycle is modeled and simulated. Very detailed behavioral patterns and parameters are modeled and as result a simulation model is obtained, that shows a behavior very close to the living slime mold. This result is consolidated by extensive verification experiments. As consequence, this model can be used to further study the mechanism of cooperation of single cells, mechanisms of synergy and emergence, and additionally this model offers the possibility to develop more slime mold inspired algorithms.

Keywords

    Biological simulation, Dictyostelium discoideum, Slime mold

ASJC Scopus subject areas

Cite this

A simulation model for the whole life cycle of the slime mold Dictyostelium discoideum. / Becker, Matthias.
Proceedings: 24th European Conference on Modelling and Simulation, ECMS 2010. 2010. p. 247-252 (Proceedings - 24th European Conference on Modelling and Simulation, ECMS 2010).

Research output: Chapter in book/report/conference proceedingConference contributionResearchpeer review

Becker, M 2010, A simulation model for the whole life cycle of the slime mold Dictyostelium discoideum. in Proceedings: 24th European Conference on Modelling and Simulation, ECMS 2010. Proceedings - 24th European Conference on Modelling and Simulation, ECMS 2010, pp. 247-252, 24th European Conference on Modelling and Simulation, ECMS 2010, Kuala Lumpur, Malaysia, 1 Jun 2010. https://doi.org/10.7148/2010-0247-0252
Becker, M. (2010). A simulation model for the whole life cycle of the slime mold Dictyostelium discoideum. In Proceedings: 24th European Conference on Modelling and Simulation, ECMS 2010 (pp. 247-252). (Proceedings - 24th European Conference on Modelling and Simulation, ECMS 2010). https://doi.org/10.7148/2010-0247-0252
Becker M. A simulation model for the whole life cycle of the slime mold Dictyostelium discoideum. In Proceedings: 24th European Conference on Modelling and Simulation, ECMS 2010. 2010. p. 247-252. (Proceedings - 24th European Conference on Modelling and Simulation, ECMS 2010). doi: 10.7148/2010-0247-0252
Becker, Matthias. / A simulation model for the whole life cycle of the slime mold Dictyostelium discoideum. Proceedings: 24th European Conference on Modelling and Simulation, ECMS 2010. 2010. pp. 247-252 (Proceedings - 24th European Conference on Modelling and Simulation, ECMS 2010).
Download
@inproceedings{be760d2c30c848298315e8c0d15f88dd,
title = "A simulation model for the whole life cycle of the slime mold Dictyostelium discoideum",
abstract = "Slime molds are fascinating organisms, they can either live as an organism consisting out of a single cell or they can form a multi-cellular organism. Therefore from the biological point of view, the slime molds are studied in order to understand the evolutionary step from a single cell organism to a multi-cellular organism. Studies have shown that the behavior of cooperating single cell organisms exhibits synergistic emergent intelligence, for example finding shortest paths. Just recently, simulation and experiments with a real slime mold (Physarum polycephalum) have been used for traveling salesman like problems. In this work we present a simulation model for the slime mold Dictyostelium discoideum. Different to other studies, here the whole life-cycle is modeled and simulated. Very detailed behavioral patterns and parameters are modeled and as result a simulation model is obtained, that shows a behavior very close to the living slime mold. This result is consolidated by extensive verification experiments. As consequence, this model can be used to further study the mechanism of cooperation of single cells, mechanisms of synergy and emergence, and additionally this model offers the possibility to develop more slime mold inspired algorithms.",
keywords = "Biological simulation, Dictyostelium discoideum, Slime mold",
author = "Matthias Becker",
year = "2010",
doi = "10.7148/2010-0247-0252",
language = "English",
isbn = "9780956494405",
series = "Proceedings - 24th European Conference on Modelling and Simulation, ECMS 2010",
pages = "247--252",
booktitle = "Proceedings",
note = "24th European Conference on Modelling and Simulation, ECMS 2010 ; Conference date: 01-06-2010 Through 04-06-2010",

}

Download

TY - GEN

T1 - A simulation model for the whole life cycle of the slime mold Dictyostelium discoideum

AU - Becker, Matthias

PY - 2010

Y1 - 2010

N2 - Slime molds are fascinating organisms, they can either live as an organism consisting out of a single cell or they can form a multi-cellular organism. Therefore from the biological point of view, the slime molds are studied in order to understand the evolutionary step from a single cell organism to a multi-cellular organism. Studies have shown that the behavior of cooperating single cell organisms exhibits synergistic emergent intelligence, for example finding shortest paths. Just recently, simulation and experiments with a real slime mold (Physarum polycephalum) have been used for traveling salesman like problems. In this work we present a simulation model for the slime mold Dictyostelium discoideum. Different to other studies, here the whole life-cycle is modeled and simulated. Very detailed behavioral patterns and parameters are modeled and as result a simulation model is obtained, that shows a behavior very close to the living slime mold. This result is consolidated by extensive verification experiments. As consequence, this model can be used to further study the mechanism of cooperation of single cells, mechanisms of synergy and emergence, and additionally this model offers the possibility to develop more slime mold inspired algorithms.

AB - Slime molds are fascinating organisms, they can either live as an organism consisting out of a single cell or they can form a multi-cellular organism. Therefore from the biological point of view, the slime molds are studied in order to understand the evolutionary step from a single cell organism to a multi-cellular organism. Studies have shown that the behavior of cooperating single cell organisms exhibits synergistic emergent intelligence, for example finding shortest paths. Just recently, simulation and experiments with a real slime mold (Physarum polycephalum) have been used for traveling salesman like problems. In this work we present a simulation model for the slime mold Dictyostelium discoideum. Different to other studies, here the whole life-cycle is modeled and simulated. Very detailed behavioral patterns and parameters are modeled and as result a simulation model is obtained, that shows a behavior very close to the living slime mold. This result is consolidated by extensive verification experiments. As consequence, this model can be used to further study the mechanism of cooperation of single cells, mechanisms of synergy and emergence, and additionally this model offers the possibility to develop more slime mold inspired algorithms.

KW - Biological simulation

KW - Dictyostelium discoideum

KW - Slime mold

UR - http://www.scopus.com/inward/record.url?scp=84857948787&partnerID=8YFLogxK

U2 - 10.7148/2010-0247-0252

DO - 10.7148/2010-0247-0252

M3 - Conference contribution

AN - SCOPUS:84857948787

SN - 9780956494405

T3 - Proceedings - 24th European Conference on Modelling and Simulation, ECMS 2010

SP - 247

EP - 252

BT - Proceedings

T2 - 24th European Conference on Modelling and Simulation, ECMS 2010

Y2 - 1 June 2010 through 4 June 2010

ER -