1. 2026
  2. Published

    Acidotolerant soil nitrite oxidizer “Candidatus Nitrobacter laanbroekii” NHB1 alleviates constraints on growth of acidophilic soil ammonia oxidizers

    Bachtsevani, E., Hink, L., Meng, Y., Sedlacek, C. J., Lee, S., Daims, H., Wagner, M., Gubry-Rangin, C., De Boer, W., Hazard, C., Prosser, J. I. & Nicol, G. W., Jan 2026, In: ISME Communications. 6, 1, ycaf244.

    Research output: Contribution to journalArticleResearchpeer review

  3. 2025
  4. E-pub ahead of print

    Design-based soil sampling strategy for unbiased and precise soil characteristics in arable fields

    Frohloff, D., Rytz, A., Clare, M., Cropano, C., Lassalle, G., Horn, M. A., Soussan, E. & Ho, A., 10 Dec 2025, (E-pub ahead of print) In: Biology and fertility of soils.

    Research output: Contribution to journalArticleResearchpeer review

  5. Published

    A comprehensive overview of the effects of probiotics, prebiotics and synbiotics on the gut-brain axis

    Kezer, G., Paramithiotis, S., Khwaldia, K., Harahap, I. A., Čagalj, M., Šimat, V., Smaoui, S., Elfalleh, W., Ozogul, F. & Esatbeyoglu, T., 17 Oct 2025, In: Frontiers in Microbiology. 16, 1651965.

    Research output: Contribution to journalReview articleResearchpeer review

  6. Published

    Deciphering the microbial players driving straw decomposition and accumulation in soil components of particulate and mineral-associated organic matter

    Fu, Y., Xu, Y., Wang, Q., Van Zwieten, L., Liang, C., Xu, J., Guggenberger, G. & Luo, Y., Oct 2025, In: Soil Biology and Biochemistry. 209, 109871.

    Research output: Contribution to journalArticleResearchpeer review

  7. Published

    Microbial metabolisms determine soil priming effect induced by organic inputs

    Fu, Y., Liu, W., Chen, Z., Redmile-Gordon, M., Liang, C., Tang, C., Guggenberger, G., Yan, S., Yin, L., Peng, J., Van Zwieten, L., Wang, P., Chen, J., Kuzyakov, Y., Ge, T., Xu, J. & Luo, Y., Oct 2025, In: Soil Biology and Biochemistry. 209, 109885.

    Research output: Contribution to journalArticleResearchpeer review

  8. Published

    Microplastic impacts archaeal abundance, microbial communities and their network connectivity in a Sub Saharan soil environment

    Rohrbach, S., Gkoutselis, G., Hink, L., Weig, A. R., Rambold, G. & Horn, M. A., Oct 2025, In: FEMS microbiology ecology. 101, 10, fiaf085.

    Research output: Contribution to journalArticleResearchpeer review

  9. Published

    Polyethylene terephthalate (PET) biodeterioration by microalgae: preliminary insights from the screening of indigenous species

    Parida, D., Kiran, K., Sangtani, R., Nogueira, R. & Bala, K., 22 Sept 2025, In: BIODEGRADATION. 36, 5, 90.

    Research output: Contribution to journalArticleResearchpeer review

  10. Published

    Deciphering the microbial mechanisms underlying glucose induced soil priming effects under low and high nutrient levels

    Wang, J., Zhang, X., Fu, Y., Van Zwieten, L., Sun, H., Guggenberger, G., Hu, L., Luo, Y., Ge, T. & Kuzyakov, Y., Sept 2025, In: European journal of soil biology. 126, 103757.

    Research output: Contribution to journalArticleResearchpeer review

  11. Published

    Transient colonization by Priestia megaterium B1L5 alters the structure of the rhizosphere microbiome towards potential plant beneficial bacterial groups in apple plantlets

    Mahmoud, F. M., Edelmann, H., Si, Y., Endrejat, L., Pritsch, K., Gutjahr, C., Ehrenreich, A., Winkelmann, T., Winkler, J. B., Schnitzler, J. & Schloter, M., 13 Aug 2025, In: Environmental Microbiome. 20, 1, 104.

    Research output: Contribution to journalArticleResearchpeer review

  12. Published

    High soil salinity reduces straw decomposition but primes soil organic carbon loss

    Chen, M., Kuzyakov, Y., Zhou, J., Zamanian, K., Wang, S., Abdalla, K., Wang, J., Li, X., Li, H., Zhang, H., Mganga, K. Z., Li, Y. & Blagodatskaya, E., Aug 2025, In: Soil Biology and Biochemistry. 207, 109835.

    Research output: Contribution to journalArticleResearchpeer review

  13. Published

    Catch crop amendments and microbial inoculants differently modulate apple rhizosphere microbiomes and plant responses

    Hauschild, K., Giongo, A., Liu, B., Babin, D., Bloem, E., Beerhues, L., Winkelmann, T. & Smalla, K., 16 Jun 2025, In: FEMS microbiology ecology. 101, 6, fiaf055.

    Research output: Contribution to journalArticleResearchpeer review

  14. Published

    Distinct Microbial Taxa Are Associated with LDL‐Cholesterol Reduction after 12 Weeks of Lactobacillus plantarum Intake in Mild Hypercholesterolemia: Results of a Randomized Controlled Study

    Müller, M., Kerlikowsky, F., Greupner, T., Amend, L., Strowig, T. & Hahn, A., Jun 2025, In: Probiotics and Antimicrobial Proteins. 17, 3, p. 1086–1095 10 p., e9679.

    Research output: Contribution to journalArticleResearchpeer review

  15. Published

    The short cytoplasmic region of phage T4 holin is essential for the transition from impermeable membrane protein complexes to permeable pores

    Schwarzkopf, J. M. F., Viveros, R. P., Burdur, A. N., Mehner-Breitfeld, D., Tschowri, N. & Brüser, T., 30 May 2025, In: Frontiers in Microbiology. 16, 1579756.

    Research output: Contribution to journalArticleResearchpeer review

  16. Published

    Highly potent quinoxalinediones inhibit α-hemolysin and ameliorate Staphylococcus aureus lung infections

    Shekhar, A., Di Lucrezia, R., Jerye, K., Korotkov, V. S., Harmrolfs, K., Rox, K., Weich, H. A., Ghai, I., Delhommel, F., Becher, I., Degenhart, C., Fansa, E., Unger, A., Habenberger, P., Klebl, B., Lukat, P., Schmelz, S., Henke, S., Borgert, S., Lang, J. C., Sasse, F., Diestel, R., Richter, C., Schneider-Daum, N., Hinkelmann, B., Niemz, J., Lehr, C. M., Jänsch, L., Huehn, J., Alm, R., Savitski, M., Welte, T., Hesterkamp, T., Sattler, M., Winterhalter, M., Blankenfeldt, W., Medina, E., Bilitewski, U., Dinkel, K. & Brönstrup, M., 9 Apr 2025, In: Cell Host and Microbe. 33, 4, p. 560-572.e21

    Research output: Contribution to journalArticleResearchpeer review

  17. Published

    Moderate effects of distance to air-filled macropores on denitrification potentials in soils

    Dijk, H. V., Geers-Lucas, M., Henjes, S., Rohe, L., Vogel, H., Horn, M. A. & Schlüter, S., Apr 2025, In: Biology and fertility of soils. 61, 3, p. 385–399 15 p.

    Research output: Contribution to journalArticleResearchpeer review

  18. Published

    Enhancing microbial predator–prey detection with network and trait-based analyses

    Martínez Rendón, C., Braun, C., Kappelsberger, M., Boy, J., Casanova-Katny, A., Glaser, K. & Dumack, K., 4 Feb 2025, In: MICROBIOME. 13, 1, 37.

    Research output: Contribution to journalArticleResearchpeer review

  19. 2024
  20. Published

    A nucleoside signal generated by a fungal endophyte regulates host cell death and promotes root colonization

    Dunken, N., Widmer, H., Balcke, G. U., Straube, H., Langen, G., Charura, N. M., Saake, P., De Quattro, C., Schön, J., Rövenich, H., Wawra, S., Khan, M., Djamei, A., Zurbriggen, M. D., Tissier, A., Witte, C. P. & Zuccaro, A., 11 Dec 2024, In: Cell Host and Microbe. 32, 12, p. 2161-2177.e7 25 p.

    Research output: Contribution to journalArticleResearchpeer review

  21. Published

    Coupling methane oxidation and N2 fixation under methanogenic conditions in contrasting environments

    Mo, Y., Li, J., Peng, X., Ho, A. & Jia, Z., Dec 2024, In: European journal of soil biology. 123, 4 p., 103693.

    Research output: Contribution to journalArticleResearchpeer review

  22. Published

    Synergy and competition during the anaerobic degradation of N-acetylglucosamine in a methane-emitting, subarctic, pH-neutral fen

    Kujala, K., Schmidt, O. & Horn, M. A., 12 Nov 2024, In: Frontiers in microbiology. 15, 1428517.

    Research output: Contribution to journalArticleResearchpeer review

  23. Published

    Shift of microbial taxa and metabolisms relying on carbon sources of rhizodeposits and straw of Zea mays L

    Fu, Y., Luo, Y., Qi, J., He, X., Zhang, H., Guggenberger, G. & Xu, J., Nov 2024, In: Soil Biology and Biochemistry. 198, 109578.

    Research output: Contribution to journalArticleResearchpeer review

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