1. 2024
  2. E-pub ahead of print

    HiCMC: High-Efficiency Contact Matrix Compressor

    Adhisantoso, Y. G., Körner, T., Müntefering, F., Ostermann, J. & Voges, J., Dec 2024, In: BMC BIOINFORMATICS. 25, 1, 15 p., 296.

    Research output: Contribution to journalArticleResearchpeer review

  3. Published

    Targeted C•G-to-T•A base editing with TALE-cytosine deaminases in plants

    Zhang, D., Pries, V. & Boch, J., 29 Apr 2024, In: BMC Biology. 22, 1, p. 99 1 p., 99.

    Research output: Contribution to journalArticleResearchpeer review

  4. Published

    Optimal Selection of Sampling Points within Sewer Networks for Wastewater-Based Epidemiology Applications

    Yao, Y., Zhu, Y., Nogueira, R., Klawonn, F. & Wallner, M., 5 Jan 2024, In: Methods and Protocols. 7, 1, 6.

    Research output: Contribution to journalArticleResearchpeer review

  5. 2023
  6. Published

    Implementation of an Open-Source Multiplexing Ion Gate Control for High Kinetic Energy Ion Mobility Spectrometry (HiKE-IMS)

    Naylor, C. N., Clowers, B. H., Schlottmann, F., Solle, N. & Zimmermann, S., 5 Jul 2023, In: Journal of the American Society for Mass Spectrometry. 34, 7, p. 1283-1294 12 p.

    Research output: Contribution to journalArticleResearchpeer review

  7. Chemical Transformations Can Occur during DMS Separations: Lessons Learned from Beer’s Bittering Compounds

    Ieritano, C., Haack, A. & Hopkins, W. S., 13 Jun 2023, (E-pub ahead of print) In: Journal of the American Society for Mass Spectrometry. 34, 7, p. 1315-1329 15 p.

    Research output: Contribution to journalArticleResearchpeer review

  8. Published

    Validation of Field-Dependent Ion-Solvent Cluster Modeling via Direct Measurement of Cluster Size Distributions

    Haack, A., Schaefer, C., Zimmermann, S. & Hopkins, W. S., 7 Jun 2023, In: Journal of the American Society for Mass Spectrometry. 34, 6, p. 1035–1046 12 p.

    Research output: Contribution to journalArticleResearchpeer review

  9. Published

    An NMR Study of a 300-kDa AAA+ Unfoldase

    Krüger, G., Kirkpatrick, J., Mahieu, E., Franzetti, B., Gabel, F. & Carlomagno, T., 1 Jun 2023, In: Journal of molecular biology. 435, 11, 167997.

    Research output: Contribution to journalArticleResearchpeer review

  10. First-Principles Modeling of Preferential Solvation in Mixed-Modifier Differential Mobility Spectrometry

    Bissonnette, J. R., Ryan, C. R. M., Ieritano, C., Hopkins, W. S. & Haack, A., 1 Jun 2023, (E-pub ahead of print) In: Journal of the American Society for Mass Spectrometry. 34, 7, p. 1417-1427 11 p.

    Research output: Contribution to journalArticleResearchpeer review

  11. Published

    Regarding the Influence of Additives and Additional Plasma-Induced Chemical Ionization on Adduct Formation in ESI/IMS/MS

    Thoben, C., Hartner, N. T., Hitzemann, M., Raddatz, C. R., Eckermann, M., Belder, D. & Zimmermann, S., 3 May 2023, In: Journal of the American Society for Mass Spectrometry. 34, 5, p. 857-868 12 p.

    Research output: Contribution to journalArticleResearchpeer review

  12. Published

    GVC: efficient random access compression for gene sequence variations

    Adhisantoso, Y. G., Voges, J., Rohlfing, C., Tunev, V., Ohm, J. R. & Ostermann, J., 28 Mar 2023, In: BMC BIOINFORMATICS. 24, 121.

    Research output: Contribution to journalArticleResearchpeer review

  13. Published

    Structural insights into the activity regulation of full-length non-structural protein 1 from SARS-CoV-2

    Wang, Y., Kirkpatrick, J., Lage, S. Z. & Carlomagno, T., 2 Feb 2023, In: STRUCTURE. 31, 2, p. 128-137.e5

    Research output: Contribution to journalArticleResearchpeer review

  14. 2022
  15. Published

    Graph4Med: a web application and a graph database for visualizing and analyzing medical databases

    Schäfer, J., Tang, M., Luu, D., Bergmann, A. K. & Wiese, L., 12 Dec 2022, In: BMC BIOINFORMATICS. 23, 537.

    Research output: Contribution to journalArticleResearchpeer review

  16. Kinetics in DMS: Modeling Clustering and Declustering Reactions

    Haack, A. & Hopkins, W. S., 4 Nov 2022, (E-pub ahead of print) In: Journal of the American Society for Mass Spectrometry. 33, 12, p. 2250-2262 13 p.

    Research output: Contribution to journalArticleResearchpeer review

  17. Published

    Influence of Sample Gas Humidity on Product Ion Formation in High Kinetic Energy Ion Mobility Spectrometry (HiKE-IMS)

    Schaefer, C., Schlottmann, F., Kirk, A. T. & Zimmermann, S., 1 Jun 2022, In: Journal of the American Society for Mass Spectrometry. 33, 6, p. 1048-1060 13 p.

    Research output: Contribution to journalArticleResearchpeer review

  18. Improved First-Principles Model of Differential Mobility Using Higher Order Two-Temperature Theory

    Haack, A., Bissonnette, J. R., Ieritano, C. & Hopkins, W. S., 31 Jan 2022, (E-pub ahead of print) In: Journal of the American Society for Mass Spectrometry. 33, 3, p. 535-547 13 p.

    Research output: Contribution to journalArticleResearchpeer review

  19. Published

    Addressing the clinical unmet needs in primary Sjögren's Syndrome through the sharing, harmonization and federated analysis of 21 European cohorts

    Pezoulas, V. C., Goules, A., Kalatzis, F., Chatzis, L., Kourou, K. D., Venetsanopoulou, A., Exarchos, T. P., Gandolfo, S., Votis, K., Zampeli, E., Burmeister, J., May, T., Marcelino Pérez, M., Lishchuk, I., Chondrogiannis, T., Andronikou, V., Varvarigou, T., Filipovic, N., Tsiknakis, M., Baldini, C., Bombardieri, M., Bootsma, H., Bowman, S. J., Shahnawaz Soyfoo, M., Parisis, D., Delporte, C., Devauchelle-Pensec, V., Pers, J., Dörner, T., Bartoloni, E., Gerli, R., Giacomelli, R., Jonsson, R., Ng, W., Priori, R., Ramos-Casals, M., Sivils, K., Skopouli, F., Torsten, W., A. G. van Roon, J., Xavier, M., De Vita, S., Tzioufas, A. G. & Fotiadis, D. I., Jan 2022, In: Computational and structural biotechnology journal. 20, p. 471-484 14 p.

    Research output: Contribution to journalArticleResearchpeer review

  20. Published

    Nucleic acid–protein interfaces studied by MAS solid-state NMR spectroscopy

    Aguion, P. I., Marchanka, A. & Carlomagno, T., 2022, In: Journal of Structural Biology: X. 6, 100072.

    Research output: Contribution to journalArticleResearchpeer review

  21. 2021
  22. Published

    A multitask transfer learning framework for the prediction of virus-human protein–protein interactions

    Dong, N. T., Brogden, G., Gerold, G. & Khosla, M., 27 Nov 2021, In: BMC BIOINFORMATICS. 22, 1, 24 p., 572.

    Research output: Contribution to journalArticleResearchpeer review

  23. Published

    1H, 13C, and 15N backbone chemical-shift assignments of SARS-CoV-2 non-structural protein 1 (leader protein)

    Wang, Y., Kirkpatrick, J., zur Lage, S., Korn, S. M., Neißner, K., Schwalbe, H., Schlundt, A. & Carlomagno, T., Oct 2021, In: Biomolecular NMR assignments. 15, 2, p. 287-295 9 p.

    Research output: Contribution to journalArticleResearchpeer review

  24. Published

    Simulation of Cluster Dynamics of Proton-Bound Water Clusters in a High Kinetic Energy Ion-Mobility Spectrometer

    Erdogdu, D., Wißdorf, W., Allers, M., Kirk, A. T., Kersten, H., Zimmermann, S. & Benter, T., 1 Sept 2021, In: Journal of the American Society for Mass Spectrometry. 32, 9, p. 2436-2450 15 p.

    Research output: Contribution to journalArticleResearchpeer review

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