Microbial metabolisms determine soil priming effect induced by organic inputs

Publikation: Beitrag in FachzeitschriftArtikelForschungPeer-Review

Autorschaft

  • Yingyi Fu
  • Wanling Liu
  • Zhiyi Chen
  • Marc Redmile-Gordon
  • Chao Liang
  • Caixian Tang
  • Georg Guggenberger
  • Shaobin Yan
  • Liming Yin
  • Jingjing Peng
  • Lukas Van Zwieten
  • Peng Wang
  • Ji Chen
  • Yakov Kuzyakov
  • Tida Ge
  • Jianming Xu
  • Yu Luo

Externe Organisationen

  • Zhejiang University (ZJU)
  • Royal Horticultural Society (RHS)
  • CAS - Shenyang Institute of Applied Ecology
  • Graduate University of Chinese Academy of Sciences
  • La Trobe University
  • China Agricultural University
  • NSW Department of Primary Industries
  • Chinese Academy of Sciences (CAS)
  • Xi'an Jiaotong University
  • Guanzhong Plain Ecological Environment Change and Comprehensive Treatment National Observation and Research Station
  • Georg-August-Universität Göttingen
  • Ningbo University
Forschungs-netzwerk anzeigen

Details

OriginalspracheEnglisch
Aufsatznummer109885
FachzeitschriftSoil Biology and Biochemistry
Jahrgang209
Frühes Online-Datum14 Juni 2025
PublikationsstatusVeröffentlicht - Okt. 2025

Abstract

Soil microorganisms are essential in determining soil organic carbon (C) decomposition via the priming effect. However, the understanding of microbial-driven priming effects is hampered by the poor understanding of microbial metabolisms in response to different organic inputs. Based on a meta-analysis encompassing 449 experimental comparisons globally, we investigated the differences in priming effects induced by two types of substrates: sugars and lipids. Coupled with the stable isotope probing combined with metagenomics (SIP-metagenomics), an incubation with 13C-labeled glucose or glycerol (proxy of sugar or lipid products) was further conducted to investigate the priming effect and the underlying microbial mechanisms, e.g., the core bacteria taxa and their metabolism. Firstly, meta-analysis showed, at a global scale, sugars induced a significantly higher priming effect compared to lipids. Secondly, incubation experiments with these low-molecular-weight substrates further demonstrated that sugar-derived compounds stimulated greater bacterial diversity and enriched genes encoding glycoside hydrolases, resulting in a stronger priming effect. In contrast, bacterial communities utilizing lipid-derived compounds were dominated by Bacillus species, exhibiting genes associated with metabolite synthesis processes (e.g., glycosyl transferases, GTs) while concurrently depleting genes related to extracellular enzyme production (e.g., glycoside hydrolases, GHs), which collectively resulted in a weaker priming effect. This study underscores that the substrate selected bacteria taxa and their metabolisms, particularly the balance between anabolism and catabolism, play a key role in regulating the magnitude of the priming effect.

ASJC Scopus Sachgebiete

Zitieren

Microbial metabolisms determine soil priming effect induced by organic inputs. / Fu, Yingyi; Liu, Wanling; Chen, Zhiyi et al.
in: Soil Biology and Biochemistry, Jahrgang 209, 109885, 10.2025.

Publikation: Beitrag in FachzeitschriftArtikelForschungPeer-Review

Fu, Y, Liu, W, Chen, Z, Redmile-Gordon, M, Liang, C, Tang, C, Guggenberger, G, Yan, S, Yin, L, Peng, J, Van Zwieten, L, Wang, P, Chen, J, Kuzyakov, Y, Ge, T, Xu, J & Luo, Y 2025, 'Microbial metabolisms determine soil priming effect induced by organic inputs', Soil Biology and Biochemistry, Jg. 209, 109885. https://doi.org/10.1016/j.soilbio.2025.109885
Fu, Y., Liu, W., Chen, Z., Redmile-Gordon, M., Liang, C., Tang, C., Guggenberger, G., Yan, S., Yin, L., Peng, J., Van Zwieten, L., Wang, P., Chen, J., Kuzyakov, Y., Ge, T., Xu, J., & Luo, Y. (2025). Microbial metabolisms determine soil priming effect induced by organic inputs. Soil Biology and Biochemistry, 209, Artikel 109885. https://doi.org/10.1016/j.soilbio.2025.109885
Fu Y, Liu W, Chen Z, Redmile-Gordon M, Liang C, Tang C et al. Microbial metabolisms determine soil priming effect induced by organic inputs. Soil Biology and Biochemistry. 2025 Okt;209:109885. Epub 2025 Jun 14. doi: 10.1016/j.soilbio.2025.109885
Fu, Yingyi ; Liu, Wanling ; Chen, Zhiyi et al. / Microbial metabolisms determine soil priming effect induced by organic inputs. in: Soil Biology and Biochemistry. 2025 ; Jahrgang 209.
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title = "Microbial metabolisms determine soil priming effect induced by organic inputs",
abstract = "Soil microorganisms are essential in determining soil organic carbon (C) decomposition via the priming effect. However, the understanding of microbial-driven priming effects is hampered by the poor understanding of microbial metabolisms in response to different organic inputs. Based on a meta-analysis encompassing 449 experimental comparisons globally, we investigated the differences in priming effects induced by two types of substrates: sugars and lipids. Coupled with the stable isotope probing combined with metagenomics (SIP-metagenomics), an incubation with 13C-labeled glucose or glycerol (proxy of sugar or lipid products) was further conducted to investigate the priming effect and the underlying microbial mechanisms, e.g., the core bacteria taxa and their metabolism. Firstly, meta-analysis showed, at a global scale, sugars induced a significantly higher priming effect compared to lipids. Secondly, incubation experiments with these low-molecular-weight substrates further demonstrated that sugar-derived compounds stimulated greater bacterial diversity and enriched genes encoding glycoside hydrolases, resulting in a stronger priming effect. In contrast, bacterial communities utilizing lipid-derived compounds were dominated by Bacillus species, exhibiting genes associated with metabolite synthesis processes (e.g., glycosyl transferases, GTs) while concurrently depleting genes related to extracellular enzyme production (e.g., glycoside hydrolases, GHs), which collectively resulted in a weaker priming effect. This study underscores that the substrate selected bacteria taxa and their metabolisms, particularly the balance between anabolism and catabolism, play a key role in regulating the magnitude of the priming effect.",
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author = "Yingyi Fu and Wanling Liu and Zhiyi Chen and Marc Redmile-Gordon and Chao Liang and Caixian Tang and Georg Guggenberger and Shaobin Yan and Liming Yin and Jingjing Peng and {Van Zwieten}, Lukas and Peng Wang and Ji Chen and Yakov Kuzyakov and Tida Ge and Jianming Xu and Yu Luo",
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T1 - Microbial metabolisms determine soil priming effect induced by organic inputs

AU - Fu, Yingyi

AU - Liu, Wanling

AU - Chen, Zhiyi

AU - Redmile-Gordon, Marc

AU - Liang, Chao

AU - Tang, Caixian

AU - Guggenberger, Georg

AU - Yan, Shaobin

AU - Yin, Liming

AU - Peng, Jingjing

AU - Van Zwieten, Lukas

AU - Wang, Peng

AU - Chen, Ji

AU - Kuzyakov, Yakov

AU - Ge, Tida

AU - Xu, Jianming

AU - Luo, Yu

N1 - Publisher Copyright: © 2025

PY - 2025/10

Y1 - 2025/10

N2 - Soil microorganisms are essential in determining soil organic carbon (C) decomposition via the priming effect. However, the understanding of microbial-driven priming effects is hampered by the poor understanding of microbial metabolisms in response to different organic inputs. Based on a meta-analysis encompassing 449 experimental comparisons globally, we investigated the differences in priming effects induced by two types of substrates: sugars and lipids. Coupled with the stable isotope probing combined with metagenomics (SIP-metagenomics), an incubation with 13C-labeled glucose or glycerol (proxy of sugar or lipid products) was further conducted to investigate the priming effect and the underlying microbial mechanisms, e.g., the core bacteria taxa and their metabolism. Firstly, meta-analysis showed, at a global scale, sugars induced a significantly higher priming effect compared to lipids. Secondly, incubation experiments with these low-molecular-weight substrates further demonstrated that sugar-derived compounds stimulated greater bacterial diversity and enriched genes encoding glycoside hydrolases, resulting in a stronger priming effect. In contrast, bacterial communities utilizing lipid-derived compounds were dominated by Bacillus species, exhibiting genes associated with metabolite synthesis processes (e.g., glycosyl transferases, GTs) while concurrently depleting genes related to extracellular enzyme production (e.g., glycoside hydrolases, GHs), which collectively resulted in a weaker priming effect. This study underscores that the substrate selected bacteria taxa and their metabolisms, particularly the balance between anabolism and catabolism, play a key role in regulating the magnitude of the priming effect.

AB - Soil microorganisms are essential in determining soil organic carbon (C) decomposition via the priming effect. However, the understanding of microbial-driven priming effects is hampered by the poor understanding of microbial metabolisms in response to different organic inputs. Based on a meta-analysis encompassing 449 experimental comparisons globally, we investigated the differences in priming effects induced by two types of substrates: sugars and lipids. Coupled with the stable isotope probing combined with metagenomics (SIP-metagenomics), an incubation with 13C-labeled glucose or glycerol (proxy of sugar or lipid products) was further conducted to investigate the priming effect and the underlying microbial mechanisms, e.g., the core bacteria taxa and their metabolism. Firstly, meta-analysis showed, at a global scale, sugars induced a significantly higher priming effect compared to lipids. Secondly, incubation experiments with these low-molecular-weight substrates further demonstrated that sugar-derived compounds stimulated greater bacterial diversity and enriched genes encoding glycoside hydrolases, resulting in a stronger priming effect. In contrast, bacterial communities utilizing lipid-derived compounds were dominated by Bacillus species, exhibiting genes associated with metabolite synthesis processes (e.g., glycosyl transferases, GTs) while concurrently depleting genes related to extracellular enzyme production (e.g., glycoside hydrolases, GHs), which collectively resulted in a weaker priming effect. This study underscores that the substrate selected bacteria taxa and their metabolisms, particularly the balance between anabolism and catabolism, play a key role in regulating the magnitude of the priming effect.

KW - Carbon inputs

KW - Carbon metabolism

KW - Core microbiota

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DO - 10.1016/j.soilbio.2025.109885

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VL - 209

JO - Soil Biology and Biochemistry

JF - Soil Biology and Biochemistry

SN - 0038-0717

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ER -

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